- Predicted Gene MLOC_17343
MLOC_17343 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_17343_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_17343_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 3.69106 | 4.93939 | 4.92179 | 5.1503 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.83108 | 10.2509 | 10.7024 | 9.00794 |
INF1 | Young developing inflorescences (5mm) | 6.68378 | 6.76164 | 8.57427 | 6.34451 |
INF2 | Developing inflorescences (1-1.5 cm) | 13.7216 | 11.4567 | 11.6261 | 14.2624 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.48495 | 6.20063 | 4.8952 | 7.66735 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.05318 | 8.74447 | 9.7618 | 32.5401 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.08545 | 7.45613 | 7.5773 | 8.12111 |
CAR15 | Developing grain, bracts removed (15 DPA) | 7.7041 | 7.05104 | 8.21421 | 18.0959 |
CDS Structure of MLOC_17343
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_17343.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g21450.1 |
+2 |
0.0 |
579 |
368/813 (45%) |
13101.m02281 protein expressed protein |
TAIR PP10 |
AT3G20320.1 |
+3 |
6e-20 |
82 |
48/112 (43%) |
| Symbols: TGD2 | trigalactosyldiacylglycerol2 | chr3:7087657-7089640 REVERSE LENGTH=381 |