MLOC_17332 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.60132.697551.889371.85829
LEAShoots from the seedlings (10 cm shoot stage)23.96633.333135.327622.5844
INF1Young developing inflorescences (5mm)2.801952.169352.456461.73342
INF2Developing inflorescences (1-1.5 cm)1.504181.783321.468331.46143
ROORoots from the seedlings (10 cm shoot stage)0.1420080.7981130.3632630.668068
NODDeveloping tillers at six leaf stage, 3rd internode1.830411.817161.929055.28832
CAR5Developing grain, bracts removed (5 DPA)4.764734.470854.862693.66318
CAR15Developing grain, bracts removed (15 DPA)0.6353240.5493410.4410891.06161



CDS Structure of MLOC_17332






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_17332.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_17332.1NoneAvailableAvailablecontig_1576347 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g18450.1 -2 1e-28 123 59/65 (91%) 13102.m02069 protein GTP-binding protein typA/bipA, putative, expressed
TAIR PP10 AT5G13650.1 -2 1e-22 103 48/65 (74%) elongation factor family protein | chr5:4397821-4402364 FORWARD LENGTH=675