MLOC_17320 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.188322.199491.742662.19257
LEAShoots from the seedlings (10 cm shoot stage)1.108520.1479530.1336640.391211
INF1Young developing inflorescences (5mm)4.438474.175833.949473.79519
INF2Developing inflorescences (1-1.5 cm)3.287814.047673.694444.41772
ROORoots from the seedlings (10 cm shoot stage)0.6953471.219011.48811.47181
NODDeveloping tillers at six leaf stage, 3rd internode00.02318190.02321670.119472
CAR5Developing grain, bracts removed (5 DPA)1.825371.253931.208141.498
CAR15Developing grain, bracts removed (15 DPA)0.04717360.1249520.1137740.260692



CDS Structure of MLOC_17320






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_17320.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_17320.1CUST_9556_PI427708080AvailableAvailablecontig_1576299 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g03130.1 +3 0.0 933 489/576 (85%) 13112.m00268 protein CDC45A - Putative DNA replication initiation protein, expressed
TAIR PP10 AT3G25100.1 +3 0.0 695 363/577 (63%) | Symbols: CDC45 | cell division cycle 45 | chr3:9144292-9146082 FORWARD LENGTH=596