MLOC_17311 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.771315.166510.999412.6943
LEAShoots from the seedlings (10 cm shoot stage)9.513436.764435.964616.23127
INF1Young developing inflorescences (5mm)26.903330.213932.543522.6162
INF2Developing inflorescences (1-1.5 cm)37.539935.567129.463935.7047
ROORoots from the seedlings (10 cm shoot stage)5.764387.055494.884777.54179
NODDeveloping tillers at six leaf stage, 3rd internode2.443483.682299.6940815.5417
CAR5Developing grain, bracts removed (5 DPA)18.524519.138619.20616.8794
CAR15Developing grain, bracts removed (15 DPA)9.288849.5500510.535919.8141



CDS Structure of MLOC_17311






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_17311.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_17311.1CUST_9554_PI427708080AvailableAvailablecontig_1576274 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g40980.1 +1 1e-79 263 145/250 (58%) 13101.m04199 protein helicase, putative, expressed
TAIR PP10None-----