MLOC_17308 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.606794.332535.118034.71394
LEAShoots from the seedlings (10 cm shoot stage)2.750181.120831.114231.34254
INF1Young developing inflorescences (5mm)6.979837.13887.641976.931
INF2Developing inflorescences (1-1.5 cm)7.744297.8195610.036210.2081
ROORoots from the seedlings (10 cm shoot stage)3.328863.177255.363983.9606
NODDeveloping tillers at six leaf stage, 3rd internode1.974993.228640.6735666.91102
CAR5Developing grain, bracts removed (5 DPA)4.389244.62964.114074.77043
CAR15Developing grain, bracts removed (15 DPA)0.1187220.0596180.2187080.332251



CDS Structure of MLOC_17308






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_17308.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374162NoneNoneNoneNone
MLOC_17308.1CUST_1689_PI427708080AvailableAvailablecontig_1576268 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g52130.9 -2 1e-176 508 255/323 (79%) 13102.m05937 protein OsFBX61 - F-box domain containing protein, expressed
TAIR PP10 AT4G08980.5 -2 2e-86 275 155/331 (47%) | Symbols: FBW2 | F-BOX WITH WD-40 2 | chr4:5758993-5760108 FORWARD LENGTH=317