- Predicted Gene MLOC_17300
MLOC_17300 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_17300_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_17300_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.87387 | 2.56471 | 2.20069 | 2.17866 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.38009 | 1.25327 | 1.29241 | 1.09384 |
INF1 | Young developing inflorescences (5mm) | 6.35594 | 7.75267 | 5.67835 | 5.32279 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.48137 | 4.68361 | 4.57473 | 4.7525 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.19181 | 1.69551 | 1.11287 | 1.82683 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0911011 | 0.0594541 | 0.0978173 | 0.222157 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.97568 | 2.06826 | 2.08067 | 1.86799 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.416091 | 0.232132 | 0.316243 | 0.718067 |
CDS Structure of MLOC_17300
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_17300.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g04120.1 |
-2 |
0.0 |
740 |
393/687 (57%) |
13108.m00382 protein expressed protein |
TAIR PP10 |
AT3G07060.1 |
-2 |
8e-155 |
480 |
261/696 (38%) |
| Symbols: emb1974 | NHL domain-containing protein | chr3:2232760-2236913 FORWARD LENGTH=774 |