MLOC_17296 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.23413.453224.151653.88357
LEAShoots from the seedlings (10 cm shoot stage)7.4350316.05659.161938.26115
INF1Young developing inflorescences (5mm)3.819385.625823.876053.91502
INF2Developing inflorescences (1-1.5 cm)4.714874.253974.138924.76947
ROORoots from the seedlings (10 cm shoot stage)5.325272.529734.197123.27937
NODDeveloping tillers at six leaf stage, 3rd internode6.845712.012411.334128.4506
CAR5Developing grain, bracts removed (5 DPA)3.566295.001993.879214.13262
CAR15Developing grain, bracts removed (15 DPA)0.6446270.2973260.5185271.20266



CDS Structure of MLOC_17296






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_17296.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_17296.2CUST_11527_PI427708083AvailableAvailablecontig_1576234 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g35860.1 +2 1e-44 164 76/106 (72%) 13108.m03761 protein cytokinin dehydrogenase precursor, putative, expressed
TAIR PP10 AT5G21482.1 +2 2e-32 127 59/103 (57%) | Symbols: CKX7, ATCKX5 | cytokinin oxidase 7 | chr5:7226842-7230052 FORWARD LENGTH=524