MLOC_17289 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.72797.807159.136720
LEAShoots from the seedlings (10 cm shoot stage)14.159523.792340.55180
INF1Young developing inflorescences (5mm)3.183944.680227.226770
INF2Developing inflorescences (1-1.5 cm)7.602846.311526.535910
ROORoots from the seedlings (10 cm shoot stage)42.610721.19919.77930
NODDeveloping tillers at six leaf stage, 3rd internode13.813335.364815.64130
CAR5Developing grain, bracts removed (5 DPA)0.8674011.245530.8156360
CAR15Developing grain, bracts removed (15 DPA)4.140685.351983.055220



CDS Structure of MLOC_17289






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251995.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251995.1CUST_19096_PI427708080NoneNoneNone
MLOC_17289.1NoneAvailableNonecontig_1576213 (Mapped)
MLOC_52523.1NoneAvailableAvailablecontig_37587 (Mapped)
MLOC_75474.1NoneAvailableNonecontig_6798 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----