MLOC_17283 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.962948.522086.16364.74056
LEAShoots from the seedlings (10 cm shoot stage)27.260642.312738.959822.1838
INF1Young developing inflorescences (5mm)11.171913.413615.44117.84767
INF2Developing inflorescences (1-1.5 cm)9.7729512.8110.89058.98024
ROORoots from the seedlings (10 cm shoot stage)0.9368524.433022.413023.02419
NODDeveloping tillers at six leaf stage, 3rd internode14.348216.498917.867537.6948
CAR5Developing grain, bracts removed (5 DPA)10.365411.830310.58847.56822
CAR15Developing grain, bracts removed (15 DPA)4.237394.944686.480077.71558



CDS Structure of MLOC_17283






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_17283.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_17283.1CUST_11526_PI427708083AvailableAvailablecontig_1576189 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g29760.3 -1 2e-62 209 103/113 (91%) 13105.m03028 protein ferrochelatase-2, chloroplast precursor, putative, expressed
TAIR PP10 AT2G30390.1 -1 1e-54 191 94/113 (83%) | Symbols: FC2, FC-II, ATFC-II | ferrochelatase 2 | chr2:12951242-12953985 REVERSE LENGTH=512