- Predicted Gene MLOC_17280
MLOC_17280 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_17280_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_17280_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 6.62832 | 19.5914 | 16.1744 | 15.5684 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 16.2687 | 16.6562 | 9.92761 | 11.6822 |
INF1 | Young developing inflorescences (5mm) | 24.1404 | 20.1603 | 19.4718 | 18.7363 |
INF2 | Developing inflorescences (1-1.5 cm) | 28.6768 | 24.8716 | 27.6816 | 30.2222 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.91662 | 11.2068 | 10.8881 | 11.7214 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.02033 | 3.03051 | 3.15872 | 8.56943 |
CAR5 | Developing grain, bracts removed (5 DPA) | 18.9777 | 18.2765 | 18.4546 | 18.5931 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.91355 | 6.20138 | 6.79484 | 16.5183 |
CDS Structure of MLOC_17280
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_17280.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g20630.1 |
-3 |
4e-36 |
136 |
66/83 (80%) |
13110.m01696 protein vacuolar-sorting receptor precursor, putative, expressed |
TAIR PP10 |
AT2G14720.2 |
-3 |
8e-28 |
112 |
55/81 (68%) |
| Symbols: VSR4, VSR2;1, BP80-2;1, MTV4 | vacuolar sorting receptor 4 | chr2:6300878-6304156 REVERSE LENGTH=628 |