MLOC_17206 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.455274.744654.065754.01195
LEAShoots from the seedlings (10 cm shoot stage)5.743736.836027.116045.30594
INF1Young developing inflorescences (5mm)7.256686.235696.427675.26394
INF2Developing inflorescences (1-1.5 cm)8.921235.866797.732587.60335
ROORoots from the seedlings (10 cm shoot stage)3.782734.750635.745915.26738
NODDeveloping tillers at six leaf stage, 3rd internode1.907382.342893.483637.62019
CAR5Developing grain, bracts removed (5 DPA)6.077225.237445.925115.19271
CAR15Developing grain, bracts removed (15 DPA)4.290514.432583.64518.91112



CDS Structure of MLOC_17206






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_17206.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360074NoneNoneNoneNone
MLOC_17206.2CUST_1685_PI427708080AvailableAvailablecontig_1575945 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g45010.1 +1 4e-118 370 211/482 (44%) 13107.m04740 protein hypothetical protein
TAIR PP10None-----