- Predicted Gene MLOC_17206
MLOC_17206 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 3.45527 | 4.74465 | 4.06575 | 4.01195 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.74373 | 6.83602 | 7.11604 | 5.30594 |
INF1 | Young developing inflorescences (5mm) | 7.25668 | 6.23569 | 6.42767 | 5.26394 |
INF2 | Developing inflorescences (1-1.5 cm) | 8.92123 | 5.86679 | 7.73258 | 7.60335 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.78273 | 4.75063 | 5.74591 | 5.26738 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.90738 | 2.34289 | 3.48363 | 7.62019 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.07722 | 5.23744 | 5.92511 | 5.19271 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.29051 | 4.43258 | 3.6451 | 8.91112 |
CDS Structure of MLOC_17206
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_17206.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g45010.1 |
+1 |
4e-118 |
370 |
211/482 (44%) |
13107.m04740 protein hypothetical protein |
TAIR PP10 | None | - | - | - | - | - |