- Predicted Gene MLOC_17175
MLOC_17175 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.45817 | 23.2534 | 19.8456 | 22.2311 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 22.143 | 18.1239 | 11.0265 | 16.9337 |
| INF1 | Young developing inflorescences (5mm) | 55.0121 | 49.18 | 40.5202 | 45.497 |
| INF2 | Developing inflorescences (1-1.5 cm) | 47.1835 | 51.0841 | 46.917 | 60.5971 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.48895 | 15.8974 | 11.5958 | 22.273 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 7.66134 | 8.43641 | 9.2509 | 34.4895 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 39.6242 | 33.0097 | 38.2253 | 40.9601 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 22.0263 | 19.374 | 20.7576 | 52.5208 |
CDS Structure of MLOC_17175
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_17175.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g07690.2 |
-1 |
0.0 |
800 |
518/927 (56%) |
13107.m00758 protein PHD-finger domain containing protein, expressed |
| TAIR PP10 |
AT4G14920.1 |
-1 |
4e-66 |
243 |
175/426 (41%) |
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein | chr4:8531157-8535842 REVERSE LENGTH=1138 |