MLOC_17093 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.519935.111995.795416.28492
LEAShoots from the seedlings (10 cm shoot stage)3.928585.003116.332074.87953
INF1Young developing inflorescences (5mm)11.038612.526710.145110.5922
INF2Developing inflorescences (1-1.5 cm)14.671311.410914.179715.933
ROORoots from the seedlings (10 cm shoot stage)6.694899.031327.302812.022
NODDeveloping tillers at six leaf stage, 3rd internode1.917992.020484.70219.55709
CAR5Developing grain, bracts removed (5 DPA)6.954968.304098.323198.7578
CAR15Developing grain, bracts removed (15 DPA)2.150172.059741.912725.24826



CDS Structure of MLOC_17093






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_17093.5
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361020NoneNoneNoneNone
MLOC_17093.5CUST_17947_PI427708080AvailableAvailablecontig_1575260 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g57330.1 +3 7e-157 450 245/303 (81%) 13102.m06607 protein expressed protein
TAIR PP10 AT1G08125.1 +3 2e-107 323 188/310 (61%) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:2539748-2542230 REVERSE LENGTH=315