MLOC_1705 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains234.117210.985227.547225.513
LEAShoots from the seedlings (10 cm shoot stage)130.745133.22877.297101.737
INF1Young developing inflorescences (5mm)107.508115.235112.20696.6743
INF2Developing inflorescences (1-1.5 cm)105.76696.346696.4914108.876
ROORoots from the seedlings (10 cm shoot stage)158.797164.292143.712205.037
NODDeveloping tillers at six leaf stage, 3rd internode142.805158.94170.609585.466
CAR5Developing grain, bracts removed (5 DPA)221.999231.881255.691228.824
CAR15Developing grain, bracts removed (15 DPA)212.859218.973201.792478.239



CDS Structure of MLOC_1705






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK357584
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357584CUST_19833_PI427708080NoneNoneNone
MLOC_1705.1NoneAvailableAvailablecontig_115281 (Mapped)
MLOC_31763.1NoneAvailableNonecontig_2219947 (Not mapped)
MLOC_32508.1NoneAvailableNonecontig_229277 (Not mapped)
MLOC_34129.1NoneAvailableNonecontig_2425347 (Not mapped)
MLOC_42660.1NoneAvailableNonecontig_2657038 (Not mapped)
MLOC_9088.1NoneAvailableNonecontig_149019 (Mapped)
MLOC_9136.1NoneAvailableNonecontig_149446 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----