MLOC_17022 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.644899.707368.2853810.3153
LEAShoots from the seedlings (10 cm shoot stage)7.527153.890274.084945.15856
INF1Young developing inflorescences (5mm)44.88540.853132.448438.3834
INF2Developing inflorescences (1-1.5 cm)30.931146.538932.15349.9792
ROORoots from the seedlings (10 cm shoot stage)1.792726.047583.970928.58071
NODDeveloping tillers at six leaf stage, 3rd internode0.9487721.245241.3745.25096
CAR5Developing grain, bracts removed (5 DPA)9.716829.7874310.750511.9685
CAR15Developing grain, bracts removed (15 DPA)1.190730.7152931.71982.96524



CDS Structure of MLOC_17022






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_17022.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_17022.2CUST_17573_PI427708080AvailableAvailablecontig_1575306 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g42160.1 -3 0.0 1113 609/757 (80%) 13112.m04426 protein kinesin motor domain containing protein, putative, expressed
TAIR PP10 AT1G72250.2 -3 0.0 749 410/694 (59%) Di-glucose binding protein with Kinesin motor domain | chr1:27192902-27198118 FORWARD LENGTH=1203