- Predicted Gene MLOC_17007
MLOC_17007 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 20.5245 | 24.8941 | 24.5444 | 18.9282 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 12.9479 | 1.2281 | 1.92586 | 4.69072 |
| INF1 | Young developing inflorescences (5mm) | 70.8642 | 72.6156 | 79.1428 | 47.724 |
| INF2 | Developing inflorescences (1-1.5 cm) | 58.0212 | 73.1172 | 63.0693 | 56.2694 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 6.71963 | 15.5986 | 12.123 | 12.9695 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 17.4044 | 13.5429 | 8.60424 | 35.5112 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 35.8173 | 35.1748 | 39.2097 | 27.2438 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 55.6227 | 46.8942 | 49.6465 | 88.7322 |
CDS Structure of MLOC_17007
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_17007.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g41230.3 |
+1 |
3e-124 |
401 |
217/295 (74%) |
13112.m04299 protein tesmin/TSO1-like CXC domain containing protein, expressed |
| TAIR PP10 |
AT4G14770.1 |
+1 |
2e-68 |
243 |
142/290 (49%) |
| Symbols: TCX2, ATTCX2 | TESMIN/TSO1-like CXC 2 | chr4:8481522-8484825 REVERSE LENGTH=674 |