MLOC_17006 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.86521.348671.178661.4736
LEAShoots from the seedlings (10 cm shoot stage)1.508241.192430.815460.990958
INF1Young developing inflorescences (5mm)2.650853.236362.872562.65676
INF2Developing inflorescences (1-1.5 cm)4.484523.939194.052844.8101
ROORoots from the seedlings (10 cm shoot stage)1.810321.833281.36242.12914
NODDeveloping tillers at six leaf stage, 3rd internode1.0951.700973.259676.50434
CAR5Developing grain, bracts removed (5 DPA)2.894342.942523.082313.05863
CAR15Developing grain, bracts removed (15 DPA)1.706071.542811.291983.87111



CDS Structure of MLOC_17006






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_17006.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372603NoneNoneNoneNone
MLOC_17006.1CUST_13489_PI427708083AvailableAvailablecontig_1575260 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g02910.1 -3 7e-40 105 87/255 (34%) 13107.m00221 protein OsFBL33 - F-box domain and LRR containing protein, expressed
TAIR PP10None-----