MLOC_17005 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.08902710.2753890.1112120.151436
INF2Developing inflorescences (1-1.5 cm)0.1523640.1443590.1036570.167163
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode00.1093550.2046580.651537
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_17005






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_17005.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_17005.1CUST_9510_PI427708080AvailableAvailablecontig_1575260 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g25600.1 +3 2e-41 149 77/176 (44%) 13105.m02624 protein transposon protein, putative, unclassified, expressed
TAIR PP10 AT2G25010.1 +3 9e-20 87 64/174 (37%) Aminotransferase-like, plant mobile domain family protein | chr2:10631691-10633547 FORWARD LENGTH=509