MLOC_16990 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.67123.791475.235582.83761
LEAShoots from the seedlings (10 cm shoot stage)38.080615.50898.6532516.1977
INF1Young developing inflorescences (5mm)2.997742.180183.63681.80334
INF2Developing inflorescences (1-1.5 cm)5.874627.431628.754215.91609
ROORoots from the seedlings (10 cm shoot stage)24.541433.474940.008329.2773
NODDeveloping tillers at six leaf stage, 3rd internode3.094481.594482.30844.55308
CAR5Developing grain, bracts removed (5 DPA)2.242362.582051.708221.63004
CAR15Developing grain, bracts removed (15 DPA)0.9570480.4825960.7046481.33497



CDS Structure of MLOC_16990






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16990.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_16990.1CUST_11514_PI427708083AvailableAvailablecontig_1575189 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g44540.1 +2 8e-14 73 45/64 (70%) 13103.m04794 protein nuclear transcription factor Y subunit, putative, expressed
TAIR PP10None-----