MLOC_16977 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.473894.061034.426050
LEAShoots from the seedlings (10 cm shoot stage)00.35815500
INF1Young developing inflorescences (5mm)0.242270.3538730.09916760
INF2Developing inflorescences (1-1.5 cm)00.077383800
ROORoots from the seedlings (10 cm shoot stage)1.235321.039040.5526730
NODDeveloping tillers at six leaf stage, 3rd internode0.06908950.06909320.02887870
CAR5Developing grain, bracts removed (5 DPA)1.390070.3681730.3976450
CAR15Developing grain, bracts removed (15 DPA)0.07922860.2684120.1173110



CDS Structure of MLOC_16977






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK361880
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361880CUST_20442_PI427708080NoneNoneNone
MLOC_16977.1NoneAvailableNonecontig_1575126 (Mapped)
MLOC_28752.1NoneAvailableNonecontig_1944918 (Not mapped)
MLOC_42382.1NoneAvailableNonecontig_26406 (Mapped)
MLOC_67169.1NoneAvailableAvailablecontig_52663 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----