MLOC_16969 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.0701519.440815.710916.9721
LEAShoots from the seedlings (10 cm shoot stage)16.925413.576810.719512.4937
INF1Young developing inflorescences (5mm)59.946351.583348.16846.2845
INF2Developing inflorescences (1-1.5 cm)60.293466.881855.959969.6363
ROORoots from the seedlings (10 cm shoot stage)7.2361917.068715.085220.0601
NODDeveloping tillers at six leaf stage, 3rd internode7.081559.4323512.904534.2649
CAR5Developing grain, bracts removed (5 DPA)36.567332.571135.003934.6271
CAR15Developing grain, bracts removed (15 DPA)27.500426.878127.362962.9064



CDS Structure of MLOC_16969






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16969.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_16969.1CUST_9504_PI427708080AvailableAvailablecontig_157510 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g33980.1 +3 0.0 1608 864/994 (87%) 13109.m03402 protein bromodomain protein 103, putative, expressed
TAIR PP10 AT1G05910.1 +3 0.0 1176 651/1004 (65%) cell division cycle protein 48-related / CDC48-related | chr1:1790796-1796503 FORWARD LENGTH=1210