MLOC_16936 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.174413.098971.77322.32855
LEAShoots from the seedlings (10 cm shoot stage)6.391282.063211.920663.00892
INF1Young developing inflorescences (5mm)7.973616.785654.614494.9263
INF2Developing inflorescences (1-1.5 cm)5.485958.701954.479566.67181
ROORoots from the seedlings (10 cm shoot stage)0.361591.640611.939821.6699
NODDeveloping tillers at six leaf stage, 3rd internode1.056091.402321.449794.47757
CAR5Developing grain, bracts removed (5 DPA)3.542316.265225.582514.43205
CAR15Developing grain, bracts removed (15 DPA)1.39141.41690.8895932.66103



CDS Structure of MLOC_16936






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16936.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_16936.1CUST_11511_PI427708083AvailableAvailablecontig_1574963 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g26560.1 -2 5e-33 125 60/64 (94%) 13110.m02264 protein expressed protein
TAIR PP10 AT2G46980.3 -2 8e-12 63 29/63 (46%) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. | chr2:19299868-19303429 REVERSE LENGTH=790