MLOC_16812 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.1014542.970328.42910
LEAShoots from the seedlings (10 cm shoot stage)36.199517.439510.61610
INF1Young developing inflorescences (5mm)43.563336.477224.55870
INF2Developing inflorescences (1-1.5 cm)42.232439.719140.12670
ROORoots from the seedlings (10 cm shoot stage)7.708229.179728.51430
NODDeveloping tillers at six leaf stage, 3rd internode27.40312.43595.740330
CAR5Developing grain, bracts removed (5 DPA)62.178147.914959.38180
CAR15Developing grain, bracts removed (15 DPA)18.853316.165814.5880



CDS Structure of MLOC_16812






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK364738
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364738CUST_24814_PI427708080NoneNoneNone
MLOC_10196.1NoneAvailableNonecontig_1558593 (Not mapped)
MLOC_1512.1NoneAvailableNonecontig_1134067 (Not mapped)
MLOC_16812.1NoneAvailableNonecontig_1574562 (Mapped)
MLOC_24961.1NoneAvailableNonecontig_1663475 (Not mapped)
MLOC_28196.1NoneAvailableNonecontig_1899359 (Not mapped)
MLOC_30444.1NoneAvailableNonecontig_2097479 (Mapped)
MLOC_30790.1NoneAvailableNonecontig_212689 (Mapped)
MLOC_31910.1NoneAvailableNonecontig_2233947 (Not mapped)
MLOC_32807.1NoneAvailableNonecontig_23213 (Not mapped)
MLOC_35009.1NoneAvailableNonecontig_24528 (Not mapped)
MLOC_48632.1NoneAvailableNonecontig_327062 (Mapped)
MLOC_53403.1NoneAvailableNonecontig_383308 (Not mapped)
MLOC_65315.1NoneAvailableAvailablecontig_500362 (Mapped)
MLOC_79615.1NoneAvailableNonecontig_85997 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----