MLOC_16742 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.119512.556043.146382.89661
LEAShoots from the seedlings (10 cm shoot stage)10.947912.617112.872211.1849
INF1Young developing inflorescences (5mm)5.493885.320976.221335.44957
INF2Developing inflorescences (1-1.5 cm)3.800994.386494.113775.10154
ROORoots from the seedlings (10 cm shoot stage)0.5733870.9573491.486911.31943
NODDeveloping tillers at six leaf stage, 3rd internode6.018218.087386.8614125.8322
CAR5Developing grain, bracts removed (5 DPA)6.008426.733846.462557.14942
CAR15Developing grain, bracts removed (15 DPA)0.6082720.498360.7922111.60659



CDS Structure of MLOC_16742






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16742.6
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250821.1NoneNoneNoneNone
MLOC_16742.6CUST_1654_PI427708080AvailableAvailablecontig_157435 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g29950.1 +2 0.0 939 482/581 (83%) 13103.m03430 protein glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed
TAIR PP10 AT5G13110.1 +2 0.0 816 404/513 (79%) | Symbols: G6PD2 | glucose-6-phosphate dehydrogenase 2 | chr5:4158952-4161640 FORWARD LENGTH=596