MLOC_16722 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains130.031132.813136.878104.395
LEAShoots from the seedlings (10 cm shoot stage)116.85682.300168.663764.4612
INF1Young developing inflorescences (5mm)112.26105.01594.739766.3199
INF2Developing inflorescences (1-1.5 cm)72.553584.300474.647768.6327
ROORoots from the seedlings (10 cm shoot stage)58.873491.494777.760680.4505
NODDeveloping tillers at six leaf stage, 3rd internode90.796459.069438.7151159.819
CAR5Developing grain, bracts removed (5 DPA)99.179592.185685.696571.9627
CAR15Developing grain, bracts removed (15 DPA)24.932923.659323.533742.004



CDS Structure of MLOC_16722






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16722.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_16722.1NoneAvailableAvailablecontig_1574281 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g08560.2 +2 9e-82 277 131/161 (81%) 13101.m00897 protein DnaK family protein, putative, expressed
TAIR PP10 AT1G79930.2 +2 3e-69 241 113/160 (71%) | Symbols: HSP91 | heat shock protein 91 | chr1:30063924-30067067 REVERSE LENGTH=789