MLOC_16711 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains41.037333.445235.623637.8324
LEAShoots from the seedlings (10 cm shoot stage)28.625941.358842.506231.0383
INF1Young developing inflorescences (5mm)14.764318.041318.413715.121
INF2Developing inflorescences (1-1.5 cm)16.417315.633316.376718.9578
ROORoots from the seedlings (10 cm shoot stage)44.058745.720749.556455.8754
NODDeveloping tillers at six leaf stage, 3rd internode84.926584.6175162.009301.787
CAR5Developing grain, bracts removed (5 DPA)19.438421.1620.359622.1888
CAR15Developing grain, bracts removed (15 DPA)2.251211.898352.190385.33136



CDS Structure of MLOC_16711






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16711.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355412NoneNoneNoneNone
MLOC_16711.1CUST_1650_PI427708080AvailableAvailablecontig_1574258 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g40510.1 +2 1e-146 426 212/225 (94%) 13112.m04212 protein calcineurin B, putative, expressed
TAIR PP10 AT4G26570.1 +2 1e-134 394 196/226 (87%) | Symbols: ATCBL3, CBL3 | calcineurin B-like 3 | chr4:13408608-13409998 REVERSE LENGTH=226