- Predicted Gene MLOC_16701
MLOC_16701 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.69887 | 0.935942 | 1.29181 | 1.36439 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.49964 | 0.265078 | 0.407316 | 0.365702 |
INF1 | Young developing inflorescences (5mm) | 2.63258 | 3.84194 | 3.38021 | 3.4297 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.97317 | 3.65532 | 4.20299 | 4.78467 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.15045 | 3.3762 | 3.85111 | 4.86047 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0988647 | 0.131438 | 0.110007 | 0.44834 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.982681 | 0.875319 | 0.65921 | 1.00143 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.68342 | 1.52909 | 1.68724 | 4.62391 |
CDS Structure of MLOC_16701
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_16701.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g41700.1 |
-3 |
2e-163 |
466 |
217/249 (87%) |
13106.m04354 protein expansin precursor, putative, expressed |
TAIR PP10 |
AT4G38210.1 |
-3 |
1e-97 |
297 |
135/229 (59%) |
| Symbols: ATEXPA20, EXP20, ATEXP20, ATHEXP ALPHA 1.23, EXPA20 | expansin A20 | chr4:17922975-17923821 REVERSE LENGTH=256 |