MLOC_16646 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.646916.246386.757177.30983
LEAShoots from the seedlings (10 cm shoot stage)53.893613.575734.511427.6915
INF1Young developing inflorescences (5mm)00.030005600.0360295
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)2.347670.9892821.147521.33237
NODDeveloping tillers at six leaf stage, 3rd internode8.5719420.75150.028424943.7301
CAR5Developing grain, bracts removed (5 DPA)48.09245.808637.536747.7339
CAR15Developing grain, bracts removed (15 DPA)0.4382990.2337890.6098931.09269



CDS Structure of MLOC_16646






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16646.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355482NoneNoneNoneNone
MLOC_16646.2CUST_17945_PI427708080AvailableAvailablecontig_1573545 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g28030.1 -1 9e-164 467 228/269 (85%) 13101.m02910 protein peroxidase precursor, putative, expressed
TAIR PP10 AT5G15180.1 -1 5e-94 290 153/306 (50%) Peroxidase superfamily protein | chr5:4930561-4932211 FORWARD LENGTH=329