- Predicted Gene MLOC_16645
MLOC_16645 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 142.722 | 93.2779 | 107.121 | 95.0541 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 61.9552 | 62.5421 | 89.992 | 52.9402 |
INF1 | Young developing inflorescences (5mm) | 32.7793 | 33.3796 | 36.7215 | 23.5274 |
INF2 | Developing inflorescences (1-1.5 cm) | 20.9865 | 24.4424 | 21.3469 | 20.6398 |
ROO | Roots from the seedlings (10 cm shoot stage) | 73.644 | 82.3206 | 78.9183 | 82.4651 |
NOD | Developing tillers at six leaf stage, 3rd internode | 102.59 | 93.562 | 81.9982 | 260.765 |
CAR5 | Developing grain, bracts removed (5 DPA) | 54.244 | 64.0535 | 58.8646 | 47.2295 |
CAR15 | Developing grain, bracts removed (15 DPA) | 11.5779 | 11.3861 | 12.4648 | 21.9877 |
CDS Structure of MLOC_16645
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_16645.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g40470.1 |
-3 |
7e-21 |
92 |
44/49 (90%) |
13101.m04144 protein vacuolar ATP synthase subunit d, putative, expressed |
TAIR PP10 |
AT3G28715.2 |
-3 |
4e-20 |
89 |
41/49 (84%) |
ATPase, V0/A0 complex, subunit C/D | chr3:10778025-10780350 FORWARD LENGTH=343 |