MLOC_16644 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.763481.421641.627252.03529
LEAShoots from the seedlings (10 cm shoot stage)2.087560.627870.9174191.1545
INF1Young developing inflorescences (5mm)0.3855240.4664020.4812770.511819
INF2Developing inflorescences (1-1.5 cm)0.2337190.5609410.2433610.606454
ROORoots from the seedlings (10 cm shoot stage)1.829971.347212.864112.63779
NODDeveloping tillers at six leaf stage, 3rd internode3.3212.620820.05708758.49666
CAR5Developing grain, bracts removed (5 DPA)0.6402790.7362020.5187880.897811
CAR15Developing grain, bracts removed (15 DPA)0.1460610.1324770.04285370.348015



CDS Structure of MLOC_16644






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16644.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_16644.1CUST_9470_PI427708080AvailableAvailablecontig_1574043 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g40550.1 +2 3e-42 149 107/259 (41%) 13101.m04150 protein hsp20/alpha crystallin family protein, putative, expressed
TAIR PP10None-----