- Predicted Gene MLOC_16643
MLOC_16643 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 121.362 | 104.065 | 111.555 | 114.152 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 70.4194 | 53.4802 | 72.2358 | 56.286 |
| INF1 | Young developing inflorescences (5mm) | 33.4123 | 36.3445 | 28.9674 | 28.3618 |
| INF2 | Developing inflorescences (1-1.5 cm) | 18.4573 | 19.5986 | 20.4135 | 22.387 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 62.1334 | 64.1379 | 55.8745 | 78.8134 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 57.143 | 30.6145 | 30.4785 | 103.223 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 41.5006 | 42.6001 | 44.4545 | 44.2605 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.10776 | 5.94017 | 8.46663 | 16.5621 |
CDS Structure of MLOC_16643
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_16643.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g40570.1 |
+2 |
1e-175 |
498 |
250/274 (91%) |
13101.m04152 protein outer mitochondrial membrane porin, putative, expressed |
| TAIR PP10 |
AT3G01280.1 |
+2 |
1e-109 |
329 |
165/273 (60%) |
| Symbols: VDAC1, ATVDAC1 | voltage dependent anion channel 1 | chr3:85754-87612 FORWARD LENGTH=276 |