MLOC_16634 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1017130.04837080.1260020.0891243
LEAShoots from the seedlings (10 cm shoot stage)0.3330490.04341210.1672310.159281
INF1Young developing inflorescences (5mm)1.244130.9981160.9102190.971862
INF2Developing inflorescences (1-1.5 cm)2.950313.573464.694494.35717
ROORoots from the seedlings (10 cm shoot stage)0.3513380.5079590.3765460.571034
NODDeveloping tillers at six leaf stage, 3rd internode0.2173230.509950.5031911.52502
CAR5Developing grain, bracts removed (5 DPA)1.18651.39460.8252441.23321
CAR15Developing grain, bracts removed (15 DPA)000.04824110.15812



CDS Structure of MLOC_16634






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16634.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376470NoneNoneNoneNone
MLOC_16634.1CUST_1642_PI427708080AvailableAvailablecontig_1574012 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g01890.1 -3 0.0 622 315/494 (64%) 13102.m00117 protein cytochrome P450, putative, expressed
TAIR PP10 AT1G64950.1 -3 3e-118 365 201/466 (43%) | Symbols: CYP89A5 | cytochrome P450, family 89, subfamily A, polypeptide 5 | chr1:24127587-24129119 FORWARD LENGTH=510