MLOC_16620 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.137075.537796.750710
LEAShoots from the seedlings (10 cm shoot stage)11.665716.453512.63720
INF1Young developing inflorescences (5mm)1.402941.126961.529160
INF2Developing inflorescences (1-1.5 cm)3.631433.847044.074460
ROORoots from the seedlings (10 cm shoot stage)4.618035.950344.66630
NODDeveloping tillers at six leaf stage, 3rd internode3.969171.828450.8144460
CAR5Developing grain, bracts removed (5 DPA)9.316868.967289.273770
CAR15Developing grain, bracts removed (15 DPA)1.001670.8837932.104550



CDS Structure of MLOC_16620






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK373886
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373886CUST_25794_PI427708080NoneNoneNone
MLOC_16620.1NoneAvailableNonecontig_1573976 (Mapped)
MLOC_49046.1NoneAvailableNonecontig_334414 (Mapped)
MLOC_50196.1NoneAvailableNonecontig_356227 (Mapped)
MLOC_61593.1NoneAvailableAvailablecontig_45659 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----