MLOC_16607 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1176840.3608570.0445120.272061
LEAShoots from the seedlings (10 cm shoot stage)42.792794.276670.133865.4719
INF1Young developing inflorescences (5mm)0.1021750.06010360.0671620.0793359
INF2Developing inflorescences (1-1.5 cm)0.2046750.02609590.2036240.159851
ROORoots from the seedlings (10 cm shoot stage)0.072722800.5415910.118744
NODDeveloping tillers at six leaf stage, 3rd internode0.8427630.4931633.333433.44087
CAR5Developing grain, bracts removed (5 DPA)0.8618521.327891.056741.36055
CAR15Developing grain, bracts removed (15 DPA)0.5585290.8462020.3689711.7056



CDS Structure of MLOC_16607






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16607.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355267NoneNoneNoneNone
MLOC_16607.1CUST_1639_PI427708080AvailableAvailablecontig_1573931 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g10990.1 -2 3e-93 284 169/208 (81%) 13111.m01164 protein heat shock protein DnaJ, putative, expressed
TAIR PP10 AT4G09350.1 -2 3e-66 213 110/167 (66%) Chaperone DnaJ-domain superfamily protein | chr4:5931317-5932152 REVERSE LENGTH=249