MLOC_16595 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4090480.3652490.4008650.421803
LEAShoots from the seedlings (10 cm shoot stage)00.04248700.0376131
INF1Young developing inflorescences (5mm)000.02293150.0217414
INF2Developing inflorescences (1-1.5 cm)0.07823960.037650600.08142
ROORoots from the seedlings (10 cm shoot stage)0.2570.02758660.1238570.0828285
NODDeveloping tillers at six leaf stage, 3rd internode0.015545200.00688880.00850058
CAR5Developing grain, bracts removed (5 DPA)116.63126.754122.958131.763
CAR15Developing grain, bracts removed (15 DPA)7.902738.438774.2707819.2794



CDS Structure of MLOC_16595






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16595.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375302NoneNoneNoneNone
MLOC_16595.1CUST_1638_PI427708080AvailableAvailablecontig_1573889 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g31430.1 +3 0.0 706 333/480 (69%) 13109.m03133 protein Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed
TAIR PP10 AT2G44480.1 +3 5e-164 483 234/484 (48%) | Symbols: BGLU17 | beta glucosidase 17 | chr2:18359780-18363001 FORWARD LENGTH=517