MLOC_1658 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.32216 | 1.73467 | 1.23465 | 1.49527 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.51314 | 2.18784 | 2.33295 | 1.6891 |
| INF1 | Young developing inflorescences (5mm) | 4.65578 | 5.50958 | 5.56229 | 4.22848 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.81837 | 3.40687 | 2.60818 | 3.23451 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.470222 | 0.542681 | 0.574001 | 0.649038 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.77463 | 3.24161 | 2.07678 | 9.93338 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.65137 | 1.573 | 1.91808 | 1.62051 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.243681 | 0.0466029 | 0.195457 | 0.366622 |
CDS Structure of MLOC_1658
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_1658.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g60910.1 |
+3 |
0.0 |
621 |
310/439 (71%) |
13101.m06484 protein CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
| TAIR PP10 |
AT5G07070.1 |
+3 |
1e-179 |
526 |
258/442 (58%) |
| Symbols: CIPK2, SnRK3.2 | CBL-interacting protein kinase 2 | chr5:2196743-2198113 REVERSE LENGTH=456 |
