- Predicted Gene MLOC_16535
MLOC_16535 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_16535_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_16535_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 4.83277 | 26.4174 | 24.5906 | 14.021 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 33.2416 | 20.2229 | 14.1356 | 16.344 |
INF1 | Young developing inflorescences (5mm) | 32.1682 | 27.9409 | 27.9688 | 18.7252 |
INF2 | Developing inflorescences (1-1.5 cm) | 32.0709 | 30.6713 | 28.4047 | 26.7112 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.75856 | 18.3067 | 11.5245 | 13.9274 |
NOD | Developing tillers at six leaf stage, 3rd internode | 25.3588 | 19.6274 | 8.47608 | 49.9979 |
CAR5 | Developing grain, bracts removed (5 DPA) | 20.2382 | 17.7221 | 20.2605 | 14.2993 |
CAR15 | Developing grain, bracts removed (15 DPA) | 11.844 | 10.7173 | 11.6905 | 19.3271 |
CDS Structure of MLOC_16535
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_16535.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g56590.1 |
+2 |
1e-56 |
206 |
111/155 (72%) |
13101.m05995 protein guanine nucleotide exchange family protein, putative, expressed |
TAIR PP10 |
AT5G27970.1 |
+2 |
2e-110 |
358 |
208/312 (67%) |
ARM repeat superfamily protein | chr5:10004720-10015429 FORWARD LENGTH=1630 |