MLOC_16534 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.469135.947634.171828.1918
LEAShoots from the seedlings (10 cm shoot stage)43.038940.017832.40933.6087
INF1Young developing inflorescences (5mm)38.371334.495535.638729.1517
INF2Developing inflorescences (1-1.5 cm)48.514949.086841.600750.7118
ROORoots from the seedlings (10 cm shoot stage)9.895826.224715.246727.8256
NODDeveloping tillers at six leaf stage, 3rd internode23.160326.500724.034692.3106
CAR5Developing grain, bracts removed (5 DPA)43.173239.411543.713639.7178
CAR15Developing grain, bracts removed (15 DPA)18.200117.064321.176739.758



CDS Structure of MLOC_16534






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK364088
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364088CUST_20829_PI427708080NoneNoneNone
MLOC_16534.3NoneAvailableAvailablecontig_1573630 (Mapped)
MLOC_37909.3NoneAvailableNonecontig_2549334 (Mapped)
MLOC_38238.3NoneAvailableNonecontig_2550009 (Mapped)
MLOC_39937.1NoneAvailableNonecontig_2555544 (Not mapped)
MLOC_6573.1NoneAvailableNonecontig_137745 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----