- Predicted Gene MLOC_16498
MLOC_16498 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 69.5365 | 51.7828 | 52.225 | 54.2208 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 53.7867 | 50.756 | 76.9485 | 47.74 |
| INF1 | Young developing inflorescences (5mm) | 28.2705 | 35.9935 | 38.7379 | 27.673 |
| INF2 | Developing inflorescences (1-1.5 cm) | 30.243 | 34.1562 | 30.7147 | 33.7685 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 114.582 | 75.9156 | 79.98 | 91.185 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 84.2888 | 85.7875 | 70.2989 | 236.875 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 53.9457 | 64.906 | 51.4763 | 53.94 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 13.8979 | 12.7424 | 10.6975 | 29.721 |
CDS Structure of MLOC_16498
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_16498.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g13750.1 |
+1 |
2e-50 |
169 |
96/119 (81%) |
13103.m01594 protein erwinia induced protein 2, putative, expressed |
| TAIR PP10 |
AT1G48440.1 |
+1 |
2e-35 |
128 |
65/119 (55%) |
B-cell receptor-associated 31-like | chr1:17907075-17908327 FORWARD LENGTH=129 |
