- Predicted Gene MLOC_16489
MLOC_16489 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 34.6342 | 24.3582 | 26.8435 | 26.9769 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 14.0043 | 12.2202 | 12.1952 | 10.2539 |
| INF1 | Young developing inflorescences (5mm) | 20.2017 | 20.7037 | 19.458 | 17.1699 |
| INF2 | Developing inflorescences (1-1.5 cm) | 27.3217 | 21.9201 | 24.7501 | 26.9164 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 31.527 | 23.4131 | 24.0454 | 27.2376 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 15.0058 | 12.4268 | 12.3422 | 38.0445 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 30.2192 | 30.5471 | 32.4706 | 30.1686 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 12.8147 | 12.3855 | 13.2525 | 30.4788 |
CDS Structure of MLOC_16489
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_16489.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g34170.1 |
-3 |
6e-155 |
448 |
211/270 (78%) |
13108.m03574 protein CAF1 family ribonuclease containing protein, putative, expressed |
| TAIR PP10 |
AT2G32070.1 |
-3 |
9e-121 |
360 |
172/266 (65%) |
Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr2:13640829-13641656 REVERSE LENGTH=275 |