MLOC_1648 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains003.244350
LEAShoots from the seedlings (10 cm shoot stage)00.83457400
INF1Young developing inflorescences (5mm)0.7832272.105940.999810
INF2Developing inflorescences (1-1.5 cm)0.9916011.564641.228420
ROORoots from the seedlings (10 cm shoot stage)2.6444702.688080
NODDeveloping tillers at six leaf stage, 3rd internode0.3576370.2571520.3338620
CAR5Developing grain, bracts removed (5 DPA)0.8038070.36614700
CAR15Developing grain, bracts removed (15 DPA)0.754128000



CDS Structure of MLOC_1648






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK369875
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369875CUST_25387_PI427708080NoneNoneNone
MLOC_1648.1NoneAvailableNonecontig_1145962 (Not mapped)
MLOC_1974.1NoneAvailableAvailablecontig_117571 (Mapped)
MLOC_25022.1NoneAvailableNonecontig_166666 (Mapped)
MLOC_25024.1NoneAvailableNonecontig_166666 (Mapped)
MLOC_25919.1NoneAvailableNonecontig_1721789 (Mapped)
MLOC_29187.1NoneAvailableNonecontig_1983382 (Mapped)
MLOC_29861.1NoneAvailableNonecontig_2043605 (Not mapped)
MLOC_34779.1NoneAvailableNonecontig_2445668 (Not mapped)
MLOC_36273.1NoneAvailableNonecontig_2543495 (Not mapped)
MLOC_37299.1NoneAvailableNonecontig_2548130 (Mapped)
MLOC_42646.1NoneAvailableNonecontig_2655842 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----