MLOC_16467 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)10.02378.722286.206737.48498
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_16467






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16467.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_16467.1CUST_2375_PI427708083AvailableAvailablecontig_157347 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g03810.1 -3 9e-31 117 57/85 (67%) 13111.m00324 protein carboxyl-terminal proteinase, putative
TAIR PP10 AT2G44250.1 -3 1e-23 98 60/187 (32%) Protein of Unknown Function (DUF239) | chr2:18293457-18295414 FORWARD LENGTH=409