- Predicted Gene MLOC_16460
MLOC_16460 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_16460_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_16460_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 146.67 | 63.1911 | 78.1382 | 80.4857 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 37.2836 | 3.25094 | 10.3422 | 15.2008 |
INF1 | Young developing inflorescences (5mm) | 181.112 | 194.55 | 210.013 | 142.216 |
INF2 | Developing inflorescences (1-1.5 cm) | 122.464 | 185.527 | 177.056 | 156.542 |
ROO | Roots from the seedlings (10 cm shoot stage) | 85.0774 | 52.6395 | 79.429 | 59.0714 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.668429 | 0.663782 | 0.604522 | 5.32546 |
CAR5 | Developing grain, bracts removed (5 DPA) | 63.6442 | 71.4986 | 68.8325 | 60.1919 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.25402 | 3.04328 | 5.3806 | 10.9238 |
CDS Structure of MLOC_16460
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_16460.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g05730.1 |
-1 |
5e-37 |
132 |
67/68 (99%) |
13111.m00557 protein histone H3, putative, expressed |
TAIR PP10 |
AT5G65360.1 |
-1 |
2e-37 |
132 |
67/68 (99%) |
Histone superfamily protein | chr5:26120099-26120509 REVERSE LENGTH=136 |