- Predicted Gene MLOC_16447
MLOC_16447 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.55299 | 0.742647 | 0.811329 | 0.669703 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.307213 | 0.0819065 | 0 | 0.177828 |
| INF1 | Young developing inflorescences (5mm) | 1.46278 | 1.1839 | 1.17681 | 1.02262 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.817336 | 0.923264 | 0.983671 | 0.920025 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.518629 | 0.663177 | 0.652103 | 0.710792 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0191676 | 0.0230153 | 0.111595 | 0.114271 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.641041 | 0.740414 | 0.547575 | 0.588162 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.215648 | 0.184914 | 0.0944241 | 0.407762 |
CDS Structure of MLOC_16447
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_16447.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g02280.1 |
-3 |
0.0 |
616 |
352/511 (69%) |
13112.m00156 protein pentatricopeptide, putative, expressed |
| TAIR PP10 |
AT4G18840.1 |
-3 |
4e-96 |
314 |
155/369 (42%) |
Pentatricopeptide repeat (PPR-like) superfamily protein | chr4:10338719-10340356 REVERSE LENGTH=545 |