MLOC_16441 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.6263320.7785250.591110.619663
LEAShoots from the seedlings (10 cm shoot stage)5.7940211.851813.267.39194
INF1Young developing inflorescences (5mm)0.8746631.126740.9984050.789451
INF2Developing inflorescences (1-1.5 cm)0.9056711.091031.345281.06651
ROORoots from the seedlings (10 cm shoot stage)0.8591830.9489430.9169150.899775
NODDeveloping tillers at six leaf stage, 3rd internode5.4251412.456311.969531.0459
CAR5Developing grain, bracts removed (5 DPA)1.597781.646161.541541.37585
CAR15Developing grain, bracts removed (15 DPA)0.4397170.7302210.6068551.23503



CDS Structure of MLOC_16441






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16441.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_16441.1NoneAvailableAvailablecontig_1573396 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g36570.1 -3 7e-23 105 51/61 (84%) 13102.m03991 protein ABC1 family domain containing protein, putative, expressed
TAIR PP10 AT5G64940.2 -3 3e-19 93 43/61 (70%) | Symbols: ATATH13, ATH13 | ABC2 homolog 13 | chr5:25949116-25953326 FORWARD LENGTH=761