- Predicted Gene MLOC_16430
MLOC_16430 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_16430_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_16430_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 17.9588 | 14.8497 | 16.1637 | 13.7695 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.95246 | 11.0719 | 12.9796 | 7.90501 |
INF1 | Young developing inflorescences (5mm) | 0.361871 | 0.248442 | 0.0735856 | 0.187239 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.215863 | 0.0768034 | 0.397786 | 0.193524 |
ROO | Roots from the seedlings (10 cm shoot stage) | 23.9761 | 22.4137 | 17.324 | 19.8309 |
NOD | Developing tillers at six leaf stage, 3rd internode | 29.321 | 23.6975 | 23.3614 | 56.1111 |
CAR5 | Developing grain, bracts removed (5 DPA) | 57.6748 | 50.0453 | 45.5409 | 41.6005 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.24978 | 6.3485 | 4.23868 | 11.4796 |
CDS Structure of MLOC_16430
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_16430.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g58860.1 |
-1 |
1e-100 |
316 |
173/218 (79%) |
13104.m06200 protein harpin-induced protein 1 domain containing protein, expressed |
TAIR PP10 |
AT3G44220.1 |
-1 |
2e-43 |
158 |
76/173 (44%) |
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr3:15928216-15929645 FORWARD LENGTH=206 |