- Predicted Gene MLOC_16422
MLOC_16422 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_16422_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_16422_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 8.63051 | 18.5381 | 16.0977 | 15.6932 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 25.6968 | 28.7372 | 24.1809 | 22.0301 |
INF1 | Young developing inflorescences (5mm) | 32.2114 | 34.6943 | 40.2117 | 30.7226 |
INF2 | Developing inflorescences (1-1.5 cm) | 46.445 | 65.9405 | 45.4527 | 59.9179 |
ROO | Roots from the seedlings (10 cm shoot stage) | 21.4034 | 25.7396 | 18.6333 | 29.5697 |
NOD | Developing tillers at six leaf stage, 3rd internode | 12.6287 | 17.8559 | 21.904 | 60.0918 |
CAR5 | Developing grain, bracts removed (5 DPA) | 29.8884 | 30.2702 | 28.042 | 28.9389 |
CAR15 | Developing grain, bracts removed (15 DPA) | 14.1253 | 13.3738 | 14.1855 | 33.3641 |
CDS Structure of MLOC_16422
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_16422.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g41090.3 |
+2 |
0.0 |
608 |
288/337 (85%) |
13107.m04273 protein histone deacetylase, putative, expressed |
TAIR PP10 |
AT5G61060.1 |
+2 |
5e-162 |
475 |
217/337 (64%) |
| Symbols: HDA05, HDA5, ATHDA5 | histone deacetylase 5 | chr5:24567137-24570917 REVERSE LENGTH=660 |