- Predicted Gene MLOC_16420
MLOC_16420 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 60.732 | 60.2627 | 64.4728 | 65.5844 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 83.5855 | 103.863 | 90.7274 | 84.2767 |
| INF1 | Young developing inflorescences (5mm) | 39.5741 | 42.2047 | 45.4678 | 37.0751 |
| INF2 | Developing inflorescences (1-1.5 cm) | 23.8298 | 26.7132 | 25.2265 | 29.1074 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 35.2165 | 39.8494 | 38.5823 | 51.7444 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 116.002 | 91.4029 | 78.4828 | 326.544 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 65.3162 | 66.2287 | 64.8851 | 66.9873 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 17.8969 | 16.601 | 17.1921 | 41.2605 |
CDS Structure of MLOC_16420
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_16420.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g55420.1 |
-2 |
0.0 |
803 |
391/443 (88%) |
13102.m06354 protein aminotransferase, classes I and II, domain containing protein, expressed |
| TAIR PP10 |
AT4G31990.2 |
-2 |
0.0 |
714 |
341/417 (82%) |
| Symbols: ASP5, AAT3, ATAAT1 | aspartate aminotransferase 5 | chr4:15471074-15473521 REVERSE LENGTH=453 |