MLOC_16386 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4146590.6051740.8031720.571927
LEAShoots from the seedlings (10 cm shoot stage)1.141460.5818581.157160.899315
INF1Young developing inflorescences (5mm)1.044670.8871841.290140.898152
INF2Developing inflorescences (1-1.5 cm)1.796271.038481.330061.4355
ROORoots from the seedlings (10 cm shoot stage)0.2816070.6616050.224820.687731
NODDeveloping tillers at six leaf stage, 3rd internode0.08507690.2072710.1753630.765921
CAR5Developing grain, bracts removed (5 DPA)0.5715230.3830520.7020950.47953
CAR15Developing grain, bracts removed (15 DPA)0.4206460.3028240.1249160.649636



CDS Structure of MLOC_16386






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16386.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_16386.3NoneAvailableAvailablecontig_1573218 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10 AT5G37590.1 -3 4e-19 91 38/62 (61%) Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:14927403-14932709 REVERSE LENGTH=551