MLOC_16333 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.666616.783066.467797.15207
LEAShoots from the seedlings (10 cm shoot stage)9.1826713.365418.9411.4272
INF1Young developing inflorescences (5mm)3.161464.170784.966853.86297
INF2Developing inflorescences (1-1.5 cm)3.695164.206993.026524.48256
ROORoots from the seedlings (10 cm shoot stage)19.769215.277114.888718.3091
NODDeveloping tillers at six leaf stage, 3rd internode15.456725.580223.487170.4145
CAR5Developing grain, bracts removed (5 DPA)5.920996.49255.733856.64561
CAR15Developing grain, bracts removed (15 DPA)1.481261.762631.536994.27854



CDS Structure of MLOC_16333






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_16333.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369168NoneNoneNoneNone
MLOC_16333.1CUST_1617_PI427708080AvailableAvailablecontig_1573096 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g07210.1 +2 4e-169 488 326/414 (79%) 13105.m00788 protein metal cation transporter, putative, expressed
TAIR PP10 AT2G30080.1 +2 5e-71 233 119/167 (71%) | Symbols: ZIP6, ATZIP6 | ZIP metal ion transporter family | chr2:12838730-12840112 REVERSE LENGTH=341